Please submit cleaned PDB files for the receptor and the ligand.
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Based on the following reference:
Update of the ATTRACT force field for the prediction of protein-protein binding affinity.
Chéron JB, Zacharias M, Antonczak S, Fiorucci S, J Comput Chem, 2017, 38(21):1887-1890
DOI: 10.1002/jcc.24836